Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.49□□□□□ -0.41
Rif1Q6PR54 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gm22018-201ENSMUST00000104357 131 ntBASIC12.49□□□□□ -0.41
Rif1Q6PR54 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.49□□□□□ -0.41
Rif1Q6PR54 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm8318-201ENSMUST00000182954 872 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm43947-201ENSMUST00000203019 959 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm16476-201ENSMUST00000221544 139 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm28911-201ENSMUST00000188837 117 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm8463-201ENSMUST00000208573 613 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Gm45880-201ENSMUST00000213041 853 ntBASIC12.48□□□□□ -0.41
Rif1Q6PR54 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rif1Q6PR54 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms