Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm9522-201ENSMUST00000182394 926 ntBASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm45098-201ENSMUST00000207179 657 ntBASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm27631-201ENSMUST00000184163 466 ntBASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm45668-201ENSMUST00000211271 493 ntBASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm15823-201ENSMUST00000064305 670 ntBASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snrnp40Q6PE01 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Snrnp40Q6PE01 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snrnp40Q6PE01 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snrnp40Q6PE01 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snrnp40Q6PE01 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms