Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.68■□□□□ 0.26
Abcf1Q6P542 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.68■□□□□ 0.26
Abcf1Q6P542 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcf1Q6P542 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Gm12008-201ENSMUST00000117791 755 ntBASIC16.67■□□□□ 0.26
Abcf1Q6P542 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcf1Q6P542 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm18733-201ENSMUST00000173950 856 ntBASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.66■□□□□ 0.26
Abcf1Q6P542 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.66■□□□□ 0.26
Abcf1Q6P542 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.66■□□□□ 0.26
Abcf1Q6P542 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcf1Q6P542 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.65■□□□□ 0.26
Abcf1Q6P542 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm13418-201ENSMUST00000119097 944 ntBASIC16.65■□□□□ 0.26
Abcf1Q6P542 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.65■□□□□ 0.26
Abcf1Q6P542 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms