Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf6Q6NVF9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf6Q6NVF9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms