Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Gm45612-201ENSMUST00000211320 160 ntBASIC15.63■□□□□ 0.09
Scube3Q66PY1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.63■□□□□ 0.09
Scube3Q66PY1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scube3Q66PY1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.62■□□□□ 0.09
Scube3Q66PY1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.62■□□□□ 0.09
Scube3Q66PY1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scube3Q66PY1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.62■□□□□ 0.09
Scube3Q66PY1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.61■□□□□ 0.09
Scube3Q66PY1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.61■□□□□ 0.09
Scube3Q66PY1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms