Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col11a2Q64739 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Col11a2Q64739 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a2Q64739 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a2Q64739 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a2Q64739 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.69■□□□□ 0.42
Col11a2Q64739 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Gm15429-201ENSMUST00000151268 798 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Gm19078-201ENSMUST00000206311 727 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.69■□□□□ 0.42
Col11a2Q64739 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Col11a2Q64739 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.69■□□□□ 0.42
Col11a2Q64739 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.69■□□□□ 0.42
Col11a2Q64739 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a2Q64739 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.69■□□□□ 0.42
Col11a2Q64739 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Gm27572-201ENSMUST00000183702 255 ntBASIC17.68■□□□□ 0.42
Col11a2Q64739 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.68■□□□□ 0.42
Col11a2Q64739 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col11a2Q64739 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a2Q64739 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm13689-201ENSMUST00000119360 685 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm11803-201ENSMUST00000119966 444 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm27486-201ENSMUST00000184923 80 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.67■□□□□ 0.42
Col11a2Q64739 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col11a2Q64739 Gm6091-201ENSMUST00000098307 165 ntBASIC17.67■□□□□ 0.42
Col11a2Q64739 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms