Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC19.72■□□□□ 0.75
Gli3Q61602 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.72■□□□□ 0.75
Gli3Q61602 Dancr-204ENSMUST00000132389 2347 ntBASIC19.72■□□□□ 0.75
Gli3Q61602 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gli3Q61602 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli3Q61602 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli3Q61602 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli3Q61602 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gli3Q61602 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.71■□□□□ 0.75
Gli3Q61602 Gm27682-201ENSMUST00000183930 110 ntBASIC19.71■□□□□ 0.75
Gli3Q61602 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC19.71■□□□□ 0.75
Gli3Q61602 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Gm5161-201ENSMUST00000075243 853 ntBASIC19.71■□□□□ 0.75
Gli3Q61602 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.71■□□□□ 0.75
Gli3Q61602 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli3Q61602 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.7■□□□□ 0.74
Gli3Q61602 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC19.7■□□□□ 0.74
Gli3Q61602 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC19.7■□□□□ 0.74
Gli3Q61602 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC19.7■□□□□ 0.74
Gli3Q61602 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gli3Q61602 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gli3Q61602 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Gm38158-201ENSMUST00000194617 339 ntBASIC19.7■□□□□ 0.74
Gli3Q61602 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC19.7■□□□□ 0.74
Gli3Q61602 Gm18935-201ENSMUST00000212692 664 ntBASIC19.7■□□□□ 0.74
Gli3Q61602 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli3Q61602 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Gm29396-201ENSMUST00000185659 716 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Gm37008-201ENSMUST00000195712 319 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC19.69■□□□□ 0.74
Gli3Q61602 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Gm29705-201ENSMUST00000212598 474 ntBASIC19.69■□□□□ 0.74
Gli3Q61602 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli3Q61602 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gli3Q61602 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Gli3Q61602 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gli3Q61602 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Gm13461-201ENSMUST00000120980 662 ntBASIC19.68■□□□□ 0.74
Gli3Q61602 Gm17376-201ENSMUST00000166016 84 ntBASIC19.68■□□□□ 0.74
Gli3Q61602 Gm24514-201ENSMUST00000174961 285 ntBASIC19.68■□□□□ 0.74
Gli3Q61602 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gli3Q61602 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gli3Q61602 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli3Q61602 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Gli3Q61602 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC19.67■□□□□ 0.74
Gli3Q61602 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Gli3Q61602 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Gm5850-201ENSMUST00000192923 1206 ntBASIC19.67■□□□□ 0.74
Gli3Q61602 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.67■□□□□ 0.74
Gli3Q61602 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.67■□□□□ 0.74
Gli3Q61602 Gm6203-201ENSMUST00000209575 1342 ntBASIC19.67■□□□□ 0.74
Gli3Q61602 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli3Q61602 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms