Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.49■□□□□ 0.23
Ift88Q61371 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.49■□□□□ 0.23
Ift88Q61371 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.49■□□□□ 0.23
Ift88Q61371 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.49■□□□□ 0.23
Ift88Q61371 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ift88Q61371 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ift88Q61371 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ift88Q61371 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ift88Q61371 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ift88Q61371 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.48■□□□□ 0.23
Ift88Q61371 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.48■□□□□ 0.23
Ift88Q61371 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.48■□□□□ 0.23
Ift88Q61371 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.48■□□□□ 0.23
Ift88Q61371 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ift88Q61371 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ift88Q61371 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ift88Q61371 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ift88Q61371 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.48■□□□□ 0.23
Ift88Q61371 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.47■□□□□ 0.23
Ift88Q61371 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ift88Q61371 Gm18669-201ENSMUST00000216049 778 ntBASIC16.47■□□□□ 0.23
Ift88Q61371 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.47■□□□□ 0.23
Ift88Q61371 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.47■□□□□ 0.23
Ift88Q61371 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ift88Q61371 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.47■□□□□ 0.23
Ift88Q61371 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.47■□□□□ 0.23
Ift88Q61371 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.47■□□□□ 0.23
Ift88Q61371 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.47■□□□□ 0.23
Ift88Q61371 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ift88Q61371 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ift88Q61371 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ift88Q61371 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Gm13418-201ENSMUST00000119097 944 ntBASIC16.46■□□□□ 0.23
Ift88Q61371 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.46■□□□□ 0.23
Ift88Q61371 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.46■□□□□ 0.23
Ift88Q61371 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.46■□□□□ 0.23
Ift88Q61371 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ift88Q61371 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ift88Q61371 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ift88Q61371 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.46■□□□□ 0.22
Ift88Q61371 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ift88Q61371 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ift88Q61371 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ift88Q61371 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms