Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Gm18753-201ENSMUST00000201000 566 ntBASIC14.47□□□□□ -0.09
Col12a1Q60847 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col12a1Q60847 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.47□□□□□ -0.09
Col12a1Q60847 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col12a1Q60847 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.47□□□□□ -0.09
Col12a1Q60847 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.47□□□□□ -0.09
Col12a1Q60847 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Gm33320-201ENSMUST00000192232 530 ntBASIC14.47□□□□□ -0.09
Col12a1Q60847 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.47□□□□□ -0.09
Col12a1Q60847 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.47□□□□□ -0.09
Col12a1Q60847 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.46□□□□□ -0.09
Col12a1Q60847 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.46□□□□□ -0.09
Col12a1Q60847 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.46□□□□□ -0.09
Col12a1Q60847 Gm5370-201ENSMUST00000187187 574 ntBASIC14.46□□□□□ -0.09
Col12a1Q60847 Gm2451-201ENSMUST00000199447 999 ntBASIC14.46□□□□□ -0.09
Col12a1Q60847 Gm10290-201ENSMUST00000200451 999 ntBASIC14.46□□□□□ -0.09
Col12a1Q60847 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col12a1Q60847 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col12a1Q60847 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.46□□□□□ -0.1
Col12a1Q60847 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col12a1Q60847 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col12a1Q60847 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Col12a1Q60847 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Gm29199-201ENSMUST00000187766 775 ntBASIC14.45□□□□□ -0.1
Col12a1Q60847 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Gm24196-201ENSMUST00000179161 110 ntBASIC14.45□□□□□ -0.1
Col12a1Q60847 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Gm3961-201ENSMUST00000204425 994 ntBASIC14.45□□□□□ -0.1
Col12a1Q60847 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col12a1Q60847 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col12a1Q60847 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.44□□□□□ -0.1
Col12a1Q60847 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm15782-201ENSMUST00000121073 445 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms