Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a4Q5XF90 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a4Q5XF90 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a4Q5XF90 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Atp13a4Q5XF90 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.08■□□□□ 0.17
Atp13a4Q5XF90 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Atp13a4Q5XF90 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Atp13a4Q5XF90 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Gm14494-201ENSMUST00000118786 435 ntBASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atp13a4Q5XF90 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp13a4Q5XF90 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Gm15467-201ENSMUST00000120582 445 ntBASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp13a4Q5XF90 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms