Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Gm37444-201ENSMUST00000193605 439 ntBASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Mir125a-201ENSMUST00000083545 68 ntBASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scaf1Q5U4C3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Gm12882-201ENSMUST00000121696 517 ntBASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scaf1Q5U4C3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Gm12859-201ENSMUST00000117834 427 ntBASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scaf1Q5U4C3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms