Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vmn1r223Q5SSA0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Rps4l-201ENSMUST00000071745 943 ntBASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Grk6-207ENSMUST00000225925 2769 ntBASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r223Q5SSA0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r223Q5SSA0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Vmn1r223Q5SSA0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r223Q5SSA0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Gm8097-201ENSMUST00000117903 829 ntBASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Gm15358-201ENSMUST00000119249 520 ntBASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r223Q5SSA0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r223Q5SSA0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms