Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm13036-201ENSMUST00000117799 748 ntBASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Mir5131-201ENSMUST00000175426 93 ntBASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Gm43767-201ENSMUST00000198933 381 ntBASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5d-4Q5R1F6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5d-4Q5R1F6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms