Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Carlr-201ENSMUST00000181515 2574 ntBASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm10013-201ENSMUST00000106074 672 ntBASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm29257-201ENSMUST00000186115 639 ntBASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms