Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Gm18018-201ENSMUST00000198273 408 ntBASIC25.7■■□□□ 1.7
Trim41Q5NCC3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim41Q5NCC3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim41Q5NCC3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Gm27892-201ENSMUST00000185017 106 ntBASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Gm10313-201ENSMUST00000095320 1002 ntBASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim41Q5NCC3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Gm27533-201ENSMUST00000183800 152 ntBASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim41Q5NCC3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Trim41Q5NCC3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Gm5566-201ENSMUST00000116118 459 ntBASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim41Q5NCC3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Gm14767-201ENSMUST00000121559 586 ntBASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC25.64■■□□□ 1.7
Trim41Q5NCC3 Gm6944-201ENSMUST00000182449 1006 ntBASIC25.64■■□□□ 1.7
Trim41Q5NCC3 CT009713.10-202ENSMUST00000225734 696 ntBASIC25.64■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms