Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Shd-206ENSMUST00000225145 998 ntBASIC15.11■□□□□ 0.01
Spire1Q52KF3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.11■□□□□ 0.01
Spire1Q52KF3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.11■□□□□ 0.01
Spire1Q52KF3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spire1Q52KF3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.1■□□□□ 0.01
Spire1Q52KF3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gm2451-201ENSMUST00000199447 999 ntBASIC15.1■□□□□ 0.01
Spire1Q52KF3 Gm10290-201ENSMUST00000200451 999 ntBASIC15.1■□□□□ 0.01
Spire1Q52KF3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.1■□□□□ 0.01
Spire1Q52KF3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spire1Q52KF3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Prob1-201ENSMUST00000097619 3021 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm7488-201ENSMUST00000117148 684 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm5745-201ENSMUST00000183748 313 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gm9182-201ENSMUST00000217829 639 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.09■□□□□ 0.01
Spire1Q52KF3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spire1Q52KF3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms