Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm20949-201ENSMUST00000206478 952 ntBASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Gm6415-201ENSMUST00000118488 348 ntBASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Gm15693-201ENSMUST00000120470 637 ntBASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Gm27618-201ENSMUST00000183671 60 ntBASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rc3h1Q4VGL6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Gm5479-201ENSMUST00000160578 435 ntBASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rc3h1Q4VGL6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Gm13464-201ENSMUST00000119418 935 ntBASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Gm9824-201ENSMUST00000178707 561 ntBASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Gm27430-201ENSMUST00000184585 107 ntBASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Gm44333-201ENSMUST00000197168 107 ntBASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms