Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
R3hdm4Q4VBF2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
R3hdm4Q4VBF2 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
R3hdm4Q4VBF2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
R3hdm4Q4VBF2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
R3hdm4Q4VBF2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
R3hdm4Q4VBF2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
R3hdm4Q4VBF2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
R3hdm4Q4VBF2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gm6973-201ENSMUST00000117080 721 ntBASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
R3hdm4Q4VBF2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms