Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Gm15321-201ENSMUST00000121290 288 ntBASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx49Q4FZF3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx49Q4FZF3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Gm12859-201ENSMUST00000117834 427 ntBASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Gm6218-201ENSMUST00000219812 628 ntBASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx49Q4FZF3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx49Q4FZF3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx49Q4FZF3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx49Q4FZF3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ddx49Q4FZF3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx49Q4FZF3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms