Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Gm5479-201ENSMUST00000160578 435 ntBASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Gm29541-201ENSMUST00000191351 678 ntBASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf38aQ4FK66 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Mir7023-201ENSMUST00000185093 64 ntBASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Gm20949-201ENSMUST00000206478 952 ntBASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.34■□□□□ 0.37
Prpf38aQ4FK66 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38aQ4FK66 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38aQ4FK66 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38aQ4FK66 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38aQ4FK66 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38aQ4FK66 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Gm13464-201ENSMUST00000119418 935 ntBASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Asic1-205ENSMUST00000228185 1818 ntBASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38aQ4FK66 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Gm27618-201ENSMUST00000183671 60 ntBASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Gm27622-201ENSMUST00000183779 60 ntBASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms