Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp48Q3V0C5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Usp48Q3V0C5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp48Q3V0C5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gm13453-201ENSMUST00000118708 357 ntBASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gm7730-201ENSMUST00000212486 454 ntBASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gm10154-201ENSMUST00000084445 354 ntBASIC18.42■□□□□ 0.54
Usp48Q3V0C5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Usp48Q3V0C5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Gm18187-201ENSMUST00000196476 984 ntBASIC18.41■□□□□ 0.54
Usp48Q3V0C5 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp48Q3V0C5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Gm7488-201ENSMUST00000117148 684 ntBASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp48Q3V0C5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp48Q3V0C5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Usp48Q3V0C5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp48Q3V0C5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp48Q3V0C5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms