Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Gm38197-201ENSMUST00000192320 2122 ntBASIC19■□□□□ 0.63
Ccdc27Q3V036 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc27Q3V036 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm15358-201ENSMUST00000119249 520 ntBASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Ccdc27Q3V036 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc27Q3V036 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Gm28033-201ENSMUST00000184224 96 ntBASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc27Q3V036 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc27Q3V036 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms