Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Arhgef40Q3UPH7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Gm15460-201ENSMUST00000118147 391 ntBASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Arhgef40Q3UPH7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Gm43352-201ENSMUST00000196419 3065 ntBASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Arhgef40Q3UPH7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Gm15824-201ENSMUST00000119516 955 ntBASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Arhgef40Q3UPH7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 AC154846.1-201ENSMUST00000226278 862 ntBASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Arhgef40Q3UPH7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Gm9252-201ENSMUST00000172364 1602 ntBASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Arhgef40Q3UPH7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 AC139580.1-202ENSMUST00000223574 928 ntBASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms