Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rnf180Q3U827 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf180Q3U827 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf180Q3U827 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf180Q3U827 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm11524-201ENSMUST00000119349 807 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf180Q3U827 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm43133-201ENSMUST00000197472 463 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm43947-201ENSMUST00000203019 959 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gm6082-201ENSMUST00000215204 454 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.26■□□□□ 0.35
Rnf180Q3U827 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf180Q3U827 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm24255-201ENSMUST00000104481 128 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Gm6983-201ENSMUST00000214912 628 ntBASIC17.25■□□□□ 0.35
Rnf180Q3U827 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf180Q3U827 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Gm13464-201ENSMUST00000119418 935 ntBASIC17.24■□□□□ 0.35
Rnf180Q3U827 Gm17376-201ENSMUST00000166016 84 ntBASIC17.24■□□□□ 0.35
Rnf180Q3U827 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf180Q3U827 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf180Q3U827 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms