Protein–RNA interactions for Protein: Q3TVA9

Ccdc136, Coiled-coil domain-containing protein 136, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc136Q3TVA9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc136Q3TVA9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc136Q3TVA9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Ccdc136Q3TVA9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ccdc136Q3TVA9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc136Q3TVA9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm4691-201ENSMUST00000182339 1000 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm27838-201ENSMUST00000184829 128 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm29310-201ENSMUST00000185468 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21825-201ENSMUST00000185728 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm29109-201ENSMUST00000185895 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21896-201ENSMUST00000186520 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21873-201ENSMUST00000186728 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21794-201ENSMUST00000187056 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21880-201ENSMUST00000187275 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21826-201ENSMUST00000187451 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21198-201ENSMUST00000188393 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21749-201ENSMUST00000189343 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21901-201ENSMUST00000189568 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm29424-201ENSMUST00000189716 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm28599-201ENSMUST00000189838 694 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21867-201ENSMUST00000189917 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm29269-201ENSMUST00000190087 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21722-201ENSMUST00000190153 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm28423-201ENSMUST00000190701 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21899-201ENSMUST00000190745 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21910-201ENSMUST00000191163 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21849-201ENSMUST00000191571 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm28678-201ENSMUST00000191593 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm20910-201ENSMUST00000193268 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm21871-201ENSMUST00000194621 696 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm2451-201ENSMUST00000199447 999 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm10290-201ENSMUST00000200451 999 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm5320-201ENSMUST00000207163 1519 ntBASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc136Q3TVA9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gm11839-201ENSMUST00000120647 1953 ntBASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gm4204-201ENSMUST00000110798 1231 ntBASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gm15321-201ENSMUST00000121290 288 ntBASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Gm6263-201ENSMUST00000120029 1342 ntBASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ccdc136Q3TVA9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ccdc136Q3TVA9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ccdc136Q3TVA9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms