Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fndc4Q3TR08 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fndc4Q3TR08 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fndc4Q3TR08 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Gm7506-201ENSMUST00000207758 815 ntBASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fndc4Q3TR08 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms