Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.64□□□□□ -0.07
Q3KNL4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Q3KNL4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Q3KNL4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.64□□□□□ -0.07
Q3KNL4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.64□□□□□ -0.07
Q3KNL4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.64□□□□□ -0.07
Q3KNL4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.64□□□□□ -0.07
Q3KNL4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Q3KNL4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Q3KNL4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.63□□□□□ -0.07
Q3KNL4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.63□□□□□ -0.07
Q3KNL4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Q3KNL4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.63□□□□□ -0.07
Q3KNL4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Q3KNL4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.63□□□□□ -0.07
Q3KNL4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.63□□□□□ -0.07
Q3KNL4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Q3KNL4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.63□□□□□ -0.07
Q3KNL4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Q3KNL4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Q3KNL4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Q3KNL4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Gm13418-201ENSMUST00000119097 944 ntBASIC14.62□□□□□ -0.07
Q3KNL4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.62□□□□□ -0.07
Q3KNL4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Q3KNL4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Ank2-226ENSMUST00000189368 339 ntBASIC14.62□□□□□ -0.07
Q3KNL4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.62□□□□□ -0.07
Q3KNL4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.62□□□□□ -0.07
Q3KNL4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Q3KNL4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Q3KNL4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Q3KNL4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Q3KNL4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Q3KNL4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Q3KNL4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Q3KNL4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Q3KNL4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Q3KNL4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Q3KNL4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms