Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Rarb-207ENSMUST00000225921 2756 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm14722-201ENSMUST00000118943 689 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Proscos-202ENSMUST00000178990 666 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm8318-201ENSMUST00000182954 872 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm37629-201ENSMUST00000193635 1050 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.53□□□□□ -0.08
Col9a1Q05722 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a1Q05722 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a1Q05722 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.52□□□□□ -0.08
Col9a1Q05722 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.52□□□□□ -0.08
Col9a1Q05722 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a1Q05722 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col9a1Q05722 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col9a1Q05722 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.52□□□□□ -0.09
Col9a1Q05722 Gm28925-201ENSMUST00000188586 168 ntBASIC14.52□□□□□ -0.09
Col9a1Q05722 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Gm9229-201ENSMUST00000222777 126 ntBASIC14.52□□□□□ -0.09
Col9a1Q05722 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.52□□□□□ -0.09
Col9a1Q05722 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a1Q05722 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.52□□□□□ -0.09
Col9a1Q05722 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.52□□□□□ -0.09
Col9a1Q05722 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.51□□□□□ -0.09
Col9a1Q05722 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.51□□□□□ -0.09
Col9a1Q05722 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms