Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcr5Q04683 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.17□□□□□ -0.14
Cxcr5Q04683 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Gm17807-201ENSMUST00000186869 298 ntBASIC14.17□□□□□ -0.14
Cxcr5Q04683 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cxcr5Q04683 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.17□□□□□ -0.14
Cxcr5Q04683 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.17□□□□□ -0.14
Cxcr5Q04683 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cxcr5Q04683 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.16□□□□□ -0.14
Cxcr5Q04683 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.16□□□□□ -0.14
Cxcr5Q04683 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.16□□□□□ -0.14
Cxcr5Q04683 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcr5Q04683 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.15□□□□□ -0.14
Cxcr5Q04683 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms