Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gm15653-201ENSMUST00000119247 907 ntBASIC18.61■□□□□ 0.57
Nkx2-3P97334 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.61■□□□□ 0.57
Nkx2-3P97334 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gm6180-201ENSMUST00000065243 498 ntBASIC18.61■□□□□ 0.57
Nkx2-3P97334 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx2-3P97334 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-3P97334 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.59■□□□□ 0.57
Nkx2-3P97334 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gm21854-201ENSMUST00000179901 471 ntBASIC18.59■□□□□ 0.57
Nkx2-3P97334 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-3P97334 BC001981-202ENSMUST00000191393 1545 ntBASIC18.59■□□□□ 0.57
Nkx2-3P97334 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-3P97334 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Gm23984-201ENSMUST00000157139 203 ntBASIC18.58■□□□□ 0.56
Nkx2-3P97334 Gm10766-202ENSMUST00000194123 606 ntBASIC18.58■□□□□ 0.56
Nkx2-3P97334 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Gm20445-201ENSMUST00000061905 565 ntBASIC18.58■□□□□ 0.56
Nkx2-3P97334 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nkx2-3P97334 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms