Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.27□□□□□ -0.29
SgcbP82349 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.27□□□□□ -0.29
SgcbP82349 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SgcbP82349 Gm16198-201ENSMUST00000118766 670 ntBASIC13.26□□□□□ -0.29
SgcbP82349 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.26□□□□□ -0.29
SgcbP82349 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SgcbP82349 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SgcbP82349 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SgcbP82349 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.26□□□□□ -0.29
SgcbP82349 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.25□□□□□ -0.29
SgcbP82349 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
SgcbP82349 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Gm15427-201ENSMUST00000117288 531 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.25□□□□□ -0.29
SgcbP82349 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SgcbP82349 Gm5867-201ENSMUST00000063197 592 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.25□□□□□ -0.29
SgcbP82349 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.25□□□□□ -0.29
SgcbP82349 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SgcbP82349 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SgcbP82349 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.24□□□□□ -0.29
SgcbP82349 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms