Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Gm44390-201ENSMUST00000197533 144 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44313-201ENSMUST00000198018 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44486-201ENSMUST00000198508 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44314-201ENSMUST00000199263 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44394-201ENSMUST00000199558 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44484-201ENSMUST00000199873 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44466-201ENSMUST00000200264 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44359-201ENSMUST00000200671 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm5864-201ENSMUST00000202263 970 ntBASIC20.57■□□□□ 0.88
Stra8P70278 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.57■□□□□ 0.88
Stra8P70278 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
Stra8P70278 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Stra8P70278 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Stra8P70278 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Stra8P70278 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Stra8P70278 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Stra8P70278 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.56■□□□□ 0.88
Stra8P70278 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.56■□□□□ 0.88
Stra8P70278 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Stra8P70278 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stra8P70278 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Stra8P70278 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Stra8P70278 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Stra8P70278 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Gm45546-201ENSMUST00000211053 2394 ntBASIC20.55■□□□□ 0.88
Stra8P70278 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.55■□□□□ 0.88
Stra8P70278 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC20.55■□□□□ 0.88
Stra8P70278 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stra8P70278 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Stra8P70278 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Stra8P70278 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Stra8P70278 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.54■□□□□ 0.88
Stra8P70278 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Gm43697-201ENSMUST00000199637 2581 ntBASIC20.54■□□□□ 0.88
Stra8P70278 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.54■□□□□ 0.88
Stra8P70278 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stra8P70278 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.53■□□□□ 0.88
Stra8P70278 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.53■□□□□ 0.88
Stra8P70278 Gm6296-201ENSMUST00000222599 943 ntBASIC20.53■□□□□ 0.88
Stra8P70278 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.53■□□□□ 0.88
Stra8P70278 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC20.53■□□□□ 0.88
Stra8P70278 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms