Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm5P62322 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm5P62322 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm5P62322 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm5P62322 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm5P62322 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Gm14722-201ENSMUST00000118943 689 ntBASIC12.42□□□□□ -0.42
Lsm5P62322 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.42□□□□□ -0.42
Lsm5P62322 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Gm9987-201ENSMUST00000069768 567 ntBASIC12.42□□□□□ -0.42
Lsm5P62322 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm5P62322 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.41□□□□□ -0.42
Lsm5P62322 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Gm10653-202ENSMUST00000139570 835 ntBASIC12.41□□□□□ -0.42
Lsm5P62322 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Gm20760-201ENSMUST00000179197 648 ntBASIC12.41□□□□□ -0.42
Lsm5P62322 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.41□□□□□ -0.42
Lsm5P62322 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lsm5P62322 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm5P62322 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm5P62322 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Lsm5P62322 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.4□□□□□ -0.42
Lsm5P62322 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.4□□□□□ -0.42
Lsm5P62322 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Mir5130-201ENSMUST00000175160 84 ntBASIC12.4□□□□□ -0.42
Lsm5P62322 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.4□□□□□ -0.42
Lsm5P62322 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.4□□□□□ -0.42
Lsm5P62322 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.4□□□□□ -0.42
Lsm5P62322 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms