Protein–RNA interactions for Protein: P61460

Depdc5, GATOR complex protein DEPDC5, mousemouse

Predictions only

Length 1,591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc5P61460 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc5P61460 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc5P61460 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Depdc5P61460 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc5P61460 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc5P61460 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Depdc5P61460 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.5■■□□□ 1.03
Depdc5P61460 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc5P61460 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Depdc5P61460 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Depdc5P61460 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC21.49■■□□□ 1.03
Depdc5P61460 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC21.49■■□□□ 1.03
Depdc5P61460 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC21.49■■□□□ 1.03
Depdc5P61460 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Depdc5P61460 Gm43818-201ENSMUST00000200605 466 ntBASIC21.49■■□□□ 1.03
Depdc5P61460 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC21.49■■□□□ 1.03
Depdc5P61460 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.49■■□□□ 1.03
Depdc5P61460 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC21.49■■□□□ 1.03
Depdc5P61460 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Depdc5P61460 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc5P61460 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC21.48■■□□□ 1.03
Depdc5P61460 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Depdc5P61460 Gm11793-201ENSMUST00000120433 981 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC21.48■■□□□ 1.03
Depdc5P61460 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC21.48■■□□□ 1.03
Depdc5P61460 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Depdc5P61460 Gm4804-201ENSMUST00000182234 999 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 Ighv1-62-201ENSMUST00000193406 350 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 AC133598.1-201ENSMUST00000224327 660 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Depdc5P61460 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Mir877-201ENSMUST00000104738 85 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC21.48■■□□□ 1.03
Depdc5P61460 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc5P61460 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Depdc5P61460 AC139350.3-201ENSMUST00000226151 420 ntBASIC21.48■■□□□ 1.03
Depdc5P61460 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC21.48■■□□□ 1.03
Depdc5P61460 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Depdc5P61460 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Depdc5P61460 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm10275-202ENSMUST00000168697 495 ntBASIC21.47■■□□□ 1.03
Depdc5P61460 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm43133-201ENSMUST00000197472 463 ntBASIC21.47■■□□□ 1.03
Depdc5P61460 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc5P61460 Gm10275-201ENSMUST00000092620 635 ntBASIC21.47■■□□□ 1.03
Depdc5P61460 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Depdc5P61460 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Depdc5P61460 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 AC140406.1-201ENSMUST00000226481 465 ntBASIC21.46■■□□□ 1.03
Depdc5P61460 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 AC153526.5-201ENSMUST00000218661 2147 ntBASIC21.46■■□□□ 1.03
Depdc5P61460 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc5P61460 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Depdc5P61460 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Depdc5P61460 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc5P61460 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc5P61460 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC21.45■■□□□ 1.02
Depdc5P61460 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc5P61460 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Depdc5P61460 Gm9726-201ENSMUST00000180321 678 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms