Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.07□□□□□ -0.16
Nup43P59235 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup43P59235 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup43P59235 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup43P59235 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup43P59235 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.07□□□□□ -0.16
Nup43P59235 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.07□□□□□ -0.16
Nup43P59235 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup43P59235 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Nup43P59235 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nup43P59235 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup43P59235 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup43P59235 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup43P59235 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Nup43P59235 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nup43P59235 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nup43P59235 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.05□□□□□ -0.16
Nup43P59235 Gm9385-201ENSMUST00000117563 472 ntBASIC14.05□□□□□ -0.16
Nup43P59235 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup43P59235 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Nup43P59235 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.05□□□□□ -0.16
Nup43P59235 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.05□□□□□ -0.16
Nup43P59235 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Nup43P59235 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Gm10175-201ENSMUST00000086013 645 ntBASIC14.05□□□□□ -0.16
Nup43P59235 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup43P59235 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup43P59235 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Nup43P59235 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.05□□□□□ -0.16
Nup43P59235 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup43P59235 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup43P59235 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.04□□□□□ -0.16
Nup43P59235 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup43P59235 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup43P59235 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gm11594-201ENSMUST00000122313 162 ntBASIC14.04□□□□□ -0.16
Nup43P59235 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup43P59235 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.04□□□□□ -0.16
Nup43P59235 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Nup43P59235 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup43P59235 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms