Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm17808-201ENSMUST00000200859 894 ntBASIC17.12■□□□□ 0.33
Tpm2P58774 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.12■□□□□ 0.33
Tpm2P58774 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tpm2P58774 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tpm2P58774 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.12■□□□□ 0.33
Tpm2P58774 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm2P58774 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.11■□□□□ 0.33
Tpm2P58774 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tpm2P58774 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.11■□□□□ 0.33
Tpm2P58774 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tpm2P58774 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.11■□□□□ 0.33
Tpm2P58774 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.11■□□□□ 0.33
Tpm2P58774 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm2P58774 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Tpm2P58774 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm2P58774 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.1■□□□□ 0.33
Tpm2P58774 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.1■□□□□ 0.33
Tpm2P58774 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.1■□□□□ 0.33
Tpm2P58774 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Gm23547-201ENSMUST00000158210 271 ntBASIC17.1■□□□□ 0.33
Tpm2P58774 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tpm2P58774 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpm2P58774 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpm2P58774 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Tpm2P58774 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Rubie-203ENSMUST00000227803 2430 ntBASIC17.1■□□□□ 0.33
Tpm2P58774 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Tpm2P58774 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Tpm2P58774 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm2P58774 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tpm2P58774 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Rprl3-201ENSMUST00000157400 290 ntBASIC17.09■□□□□ 0.33
Tpm2P58774 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tpm2P58774 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Gm7367-201ENSMUST00000057611 492 ntBASIC17.09■□□□□ 0.33
Tpm2P58774 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tpm2P58774 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.09■□□□□ 0.33
Tpm2P58774 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm2P58774 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tpm2P58774 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm2P58774 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.08■□□□□ 0.33
Tpm2P58774 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms