Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.65■□□□□ 0.42
Irf5P56477 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Irf5P56477 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.65■□□□□ 0.42
Irf5P56477 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Irf5P56477 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Irf5P56477 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Irf5P56477 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Irf5P56477 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.64■□□□□ 0.42
Irf5P56477 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Irf5P56477 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.64■□□□□ 0.41
Irf5P56477 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.64■□□□□ 0.41
Irf5P56477 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Mir449b-201ENSMUST00000104833 80 ntBASIC17.64■□□□□ 0.41
Irf5P56477 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.64■□□□□ 0.41
Irf5P56477 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Irf5P56477 Rpph1-201ENSMUST00000175096 319 ntBASIC17.64■□□□□ 0.41
Irf5P56477 Gm43125-201ENSMUST00000201724 730 ntBASIC17.64■□□□□ 0.41
Irf5P56477 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.64■□□□□ 0.41
Irf5P56477 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Irf5P56477 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Irf5P56477 BC037039-201ENSMUST00000192003 2205 ntBASIC17.64■□□□□ 0.41
Irf5P56477 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.64■□□□□ 0.41
Irf5P56477 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf5P56477 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Irf5P56477 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.63■□□□□ 0.41
Irf5P56477 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Irf5P56477 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.63■□□□□ 0.41
Irf5P56477 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.63■□□□□ 0.41
Irf5P56477 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Irf5P56477 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf5P56477 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.62■□□□□ 0.41
Irf5P56477 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.62■□□□□ 0.41
Irf5P56477 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Gm5745-201ENSMUST00000183748 313 ntBASIC17.62■□□□□ 0.41
Irf5P56477 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.62■□□□□ 0.41
Irf5P56477 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Irf5P56477 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.62■□□□□ 0.41
Irf5P56477 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Irf5P56477 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.61■□□□□ 0.41
Irf5P56477 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Irf5P56477 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms