Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdh11P55288 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh11P55288 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdh11P55288 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cdh11P55288 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh11P55288 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh11P55288 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh11P55288 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh11P55288 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh11P55288 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh11P55288 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cdh11P55288 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.57□□□□□ -0.24
Cdh11P55288 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.57□□□□□ -0.24
Cdh11P55288 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Gm1401-201ENSMUST00000122048 772 ntBASIC13.57□□□□□ -0.24
Cdh11P55288 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdh11P55288 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.57□□□□□ -0.24
Cdh11P55288 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh11P55288 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh11P55288 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Cdh11P55288 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdh11P55288 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdh11P55288 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm6550-201ENSMUST00000187574 993 ntBASIC13.56□□□□□ -0.24
Cdh11P55288 Gm6089-201ENSMUST00000197666 938 ntBASIC13.56□□□□□ -0.24
Cdh11P55288 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdh11P55288 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdh11P55288 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdh11P55288 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cdh11P55288 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdh11P55288 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms