Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sox1P53783 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Sox1P53783 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.12■□□□□ 0.01
Sox1P53783 Gm5354-201ENSMUST00000182417 973 ntBASIC15.12■□□□□ 0.01
Sox1P53783 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Gm29199-201ENSMUST00000187766 775 ntBASIC15.12■□□□□ 0.01
Sox1P53783 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.12■□□□□ 0.01
Sox1P53783 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.12■□□□□ 0.01
Sox1P53783 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.12■□□□□ 0.01
Sox1P53783 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.12■□□□□ 0.01
Sox1P53783 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.12■□□□□ 0.01
Sox1P53783 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sox1P53783 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox1P53783 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Sox1P53783 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.12■□□□□ 0.01
Sox1P53783 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Gm6222-201ENSMUST00000120787 396 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.11■□□□□ 0.01
Sox1P53783 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sox1P53783 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm29310-201ENSMUST00000185468 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21825-201ENSMUST00000185728 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm29109-201ENSMUST00000185895 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21896-201ENSMUST00000186520 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21873-201ENSMUST00000186728 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21794-201ENSMUST00000187056 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21880-201ENSMUST00000187275 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21826-201ENSMUST00000187451 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21198-201ENSMUST00000188393 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21749-201ENSMUST00000189343 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21901-201ENSMUST00000189568 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm29424-201ENSMUST00000189716 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm28599-201ENSMUST00000189838 694 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21867-201ENSMUST00000189917 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm29269-201ENSMUST00000190087 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21722-201ENSMUST00000190153 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm28423-201ENSMUST00000190701 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21899-201ENSMUST00000190745 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21910-201ENSMUST00000191163 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21849-201ENSMUST00000191571 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm28678-201ENSMUST00000191593 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm20910-201ENSMUST00000193268 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Gm21871-201ENSMUST00000194621 696 ntBASIC15.11■□□□□ 0.01
Sox1P53783 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.11■□□□□ 0.01
Sox1P53783 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sox1P53783 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sox1P53783 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox1P53783 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sox1P53783 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox1P53783 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox1P53783 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox1P53783 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox1P53783 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gm14722-201ENSMUST00000118943 689 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.1■□□□□ 0.01
Sox1P53783 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.1■□□□□ 0.01
Sox1P53783 Gm27486-201ENSMUST00000184923 80 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox1P53783 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.1■□□□□ 0.01
Sox1P53783 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox1P53783 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms