Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-6P43688 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.08□□□□□ -0.16
Nkx2-6P43688 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-6P43688 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.07□□□□□ -0.16
Nkx2-6P43688 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-6P43688 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Gm9824-201ENSMUST00000178707 561 ntBASIC14.06□□□□□ -0.16
Nkx2-6P43688 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.06□□□□□ -0.16
Nkx2-6P43688 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.06□□□□□ -0.16
Nkx2-6P43688 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.06□□□□□ -0.16
Nkx2-6P43688 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-6P43688 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms