Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Gm12008-201ENSMUST00000117791 755 ntBASIC14.38□□□□□ -0.11
Tnfsf4P43488 Gm13418-201ENSMUST00000119097 944 ntBASIC14.38□□□□□ -0.11
Tnfsf4P43488 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
Tnfsf4P43488 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.37□□□□□ -0.11
Tnfsf4P43488 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.37□□□□□ -0.11
Tnfsf4P43488 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.37□□□□□ -0.11
Tnfsf4P43488 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf4P43488 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44357-201ENSMUST00000195897 142 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm19658-201ENSMUST00000196231 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44367-201ENSMUST00000196836 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44350-201ENSMUST00000197197 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44390-201ENSMUST00000197533 144 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm6089-201ENSMUST00000197666 938 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44313-201ENSMUST00000198018 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44486-201ENSMUST00000198508 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44314-201ENSMUST00000199263 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44394-201ENSMUST00000199558 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44484-201ENSMUST00000199873 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44466-201ENSMUST00000200264 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm44359-201ENSMUST00000200671 138 ntBASIC14.36□□□□□ -0.11
Tnfsf4P43488 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms