Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx2P43241 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm6222-201ENSMUST00000120787 396 ntBASIC14.08□□□□□ -0.16
Cdx2P43241 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm27631-201ENSMUST00000184163 466 ntBASIC14.08□□□□□ -0.16
Cdx2P43241 Gm43433-201ENSMUST00000196573 481 ntBASIC14.08□□□□□ -0.16
Cdx2P43241 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.08□□□□□ -0.16
Cdx2P43241 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.08□□□□□ -0.16
Cdx2P43241 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdx2P43241 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx2P43241 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cdx2P43241 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.07□□□□□ -0.16
Cdx2P43241 Gm6180-201ENSMUST00000065243 498 ntBASIC14.07□□□□□ -0.16
Cdx2P43241 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx2P43241 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cdx2P43241 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cdx2P43241 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.07□□□□□ -0.16
Cdx2P43241 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx2P43241 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdx2P43241 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdx2P43241 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdx2P43241 Gm13464-201ENSMUST00000119418 935 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Gm14042-201ENSMUST00000120139 833 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Gm3436-201ENSMUST00000179930 840 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Gm8515-201ENSMUST00000194852 576 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Gm42612-201ENSMUST00000197986 623 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Gm43170-201ENSMUST00000199827 612 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdx2P43241 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.06□□□□□ -0.16
Cdx2P43241 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdx2P43241 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms