Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Gm11793-201ENSMUST00000120433 981 ntBASIC15.59■□□□□ 0.09
HttP42859 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.59■□□□□ 0.09
HttP42859 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.59■□□□□ 0.09
HttP42859 Gm6916-202ENSMUST00000205523 195 ntBASIC15.59■□□□□ 0.09
HttP42859 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HttP42859 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HttP42859 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HttP42859 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
HttP42859 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.59■□□□□ 0.09
HttP42859 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.59■□□□□ 0.09
HttP42859 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.59■□□□□ 0.09
HttP42859 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.58■□□□□ 0.09
HttP42859 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
HttP42859 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.58■□□□□ 0.09
HttP42859 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HttP42859 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HttP42859 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HttP42859 Gm45880-201ENSMUST00000213041 853 ntBASIC15.58■□□□□ 0.08
HttP42859 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.58■□□□□ 0.08
HttP42859 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HttP42859 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.58■□□□□ 0.08
HttP42859 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.58■□□□□ 0.08
HttP42859 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HttP42859 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.58■□□□□ 0.08
HttP42859 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.58■□□□□ 0.08
HttP42859 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HttP42859 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HttP42859 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.57■□□□□ 0.08
HttP42859 Gm38266-201ENSMUST00000194931 421 ntBASIC15.57■□□□□ 0.08
HttP42859 Gm19078-201ENSMUST00000206311 727 ntBASIC15.57■□□□□ 0.08
HttP42859 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.57■□□□□ 0.08
HttP42859 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Gm22323-201ENSMUST00000103832 109 ntBASIC15.57■□□□□ 0.08
HttP42859 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HttP42859 Gm29787-201ENSMUST00000222129 849 ntBASIC15.57■□□□□ 0.08
HttP42859 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HttP42859 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HttP42859 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.56■□□□□ 0.08
HttP42859 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.56■□□□□ 0.08
HttP42859 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.56■□□□□ 0.08
HttP42859 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.56■□□□□ 0.08
HttP42859 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.56■□□□□ 0.08
HttP42859 Gm16177-201ENSMUST00000120728 718 ntBASIC15.56■□□□□ 0.08
HttP42859 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.56■□□□□ 0.08
HttP42859 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HttP42859 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HttP42859 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.56■□□□□ 0.08
HttP42859 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.56■□□□□ 0.08
HttP42859 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HttP42859 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.56■□□□□ 0.08
HttP42859 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.56■□□□□ 0.08
HttP42859 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.55■□□□□ 0.08
HttP42859 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms