Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
VhlP40338 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VhlP40338 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VhlP40338 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.23□□□□□ -0.45
VhlP40338 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
VhlP40338 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
VhlP40338 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VhlP40338 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
VhlP40338 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
VhlP40338 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
VhlP40338 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.23□□□□□ -0.45
VhlP40338 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.23□□□□□ -0.45
VhlP40338 Gm8655-201ENSMUST00000221159 852 ntBASIC12.23□□□□□ -0.45
VhlP40338 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
VhlP40338 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.23□□□□□ -0.45
VhlP40338 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VhlP40338 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
VhlP40338 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.22□□□□□ -0.45
VhlP40338 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
VhlP40338 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.22□□□□□ -0.45
VhlP40338 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.22□□□□□ -0.45
VhlP40338 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VhlP40338 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VhlP40338 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.22□□□□□ -0.45
VhlP40338 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.22□□□□□ -0.45
VhlP40338 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
VhlP40338 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.21□□□□□ -0.45
VhlP40338 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.21□□□□□ -0.45
VhlP40338 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
VhlP40338 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
VhlP40338 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Grk6-207ENSMUST00000225925 2769 ntBASIC12.21□□□□□ -0.45
VhlP40338 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
VhlP40338 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
VhlP40338 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.21□□□□□ -0.45
VhlP40338 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
VhlP40338 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
VhlP40338 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.21□□□□□ -0.45
VhlP40338 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.21□□□□□ -0.45
VhlP40338 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VhlP40338 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
VhlP40338 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms