Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.24■□□□□ 0.03
Cxcl12P40224 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cxcl12P40224 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Gm12585-201ENSMUST00000117307 290 ntBASIC15.24■□□□□ 0.03
Cxcl12P40224 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.24■□□□□ 0.03
Cxcl12P40224 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Gm5354-201ENSMUST00000182417 973 ntBASIC15.24■□□□□ 0.03
Cxcl12P40224 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.24■□□□□ 0.03
Cxcl12P40224 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cxcl12P40224 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cxcl12P40224 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl12P40224 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cxcl12P40224 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.23■□□□□ 0.03
Cxcl12P40224 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.23■□□□□ 0.03
Cxcl12P40224 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.23■□□□□ 0.03
Cxcl12P40224 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cxcl12P40224 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.23■□□□□ 0.03
Cxcl12P40224 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.23■□□□□ 0.03
Cxcl12P40224 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.23■□□□□ 0.03
Cxcl12P40224 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Mir125a-201ENSMUST00000083545 68 ntBASIC15.23■□□□□ 0.03
Cxcl12P40224 Gm5356-201ENSMUST00000093326 615 ntBASIC15.23■□□□□ 0.03
Cxcl12P40224 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.23■□□□□ 0.03
Cxcl12P40224 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl12P40224 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.22■□□□□ 0.03
Cxcl12P40224 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.22■□□□□ 0.03
Cxcl12P40224 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.22■□□□□ 0.03
Cxcl12P40224 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.22■□□□□ 0.03
Cxcl12P40224 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cxcl12P40224 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cxcl12P40224 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Celf4-206ENSMUST00000224553 1729 ntBASIC15.22■□□□□ 0.03
Cxcl12P40224 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cxcl12P40224 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl12P40224 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.21■□□□□ 0.03
Cxcl12P40224 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.21■□□□□ 0.03
Cxcl12P40224 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms