Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.23□□□□□ -0.45
Timp3P39876 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.22□□□□□ -0.45
Timp3P39876 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Timp3P39876 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.22□□□□□ -0.45
Timp3P39876 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Timp3P39876 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Timp3P39876 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Timp3P39876 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Timp3P39876 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Timp3P39876 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Timp3P39876 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Timp3P39876 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.21□□□□□ -0.45
Timp3P39876 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Timp3P39876 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.21□□□□□ -0.45
Timp3P39876 Mir1895-201ENSMUST00000122615 79 ntBASIC12.21□□□□□ -0.45
Timp3P39876 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.21□□□□□ -0.45
Timp3P39876 Gm44492-201ENSMUST00000197012 141 ntBASIC12.21□□□□□ -0.45
Timp3P39876 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Chchd1-203ENSMUST00000224633 557 ntBASIC12.21□□□□□ -0.45
Timp3P39876 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Timp3P39876 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.21□□□□□ -0.46
Timp3P39876 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Timp3P39876 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Timp3P39876 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Timp3P39876 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms