Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rab5cP35278 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab5cP35278 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab5cP35278 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab5cP35278 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rab5cP35278 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Matn2-206ENSMUST00000228570 2798 ntBASIC12.14□□□□□ -0.47
Rab5cP35278 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.14□□□□□ -0.47
Rab5cP35278 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rab5cP35278 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rab5cP35278 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm44430-201ENSMUST00000203376 995 ntBASIC12.14□□□□□ -0.47
Rab5cP35278 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab5cP35278 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab5cP35278 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.14□□□□□ -0.47
Rab5cP35278 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Rab5cP35278 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rab5cP35278 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.13□□□□□ -0.47
Rab5cP35278 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Gm10052-201ENSMUST00000168019 960 ntBASIC12.13□□□□□ -0.47
Rab5cP35278 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.13□□□□□ -0.47
Rab5cP35278 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.13□□□□□ -0.47
Rab5cP35278 Gm7729-201ENSMUST00000050143 801 ntBASIC12.13□□□□□ -0.47
Rab5cP35278 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.13□□□□□ -0.47
Rab5cP35278 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.13□□□□□ -0.47
Rab5cP35278 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Rab5cP35278 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rab5cP35278 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab5cP35278 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab5cP35278 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms