Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Gm15039-201ENSMUST00000118914 875 ntBASIC11.01□□□□□ -0.65
TbpP29037 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.01□□□□□ -0.65
TbpP29037 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.01□□□□□ -0.65
TbpP29037 Odf3b-204ENSMUST00000227834 930 ntBASIC11.01□□□□□ -0.65
TbpP29037 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
TbpP29037 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11□□□□□ -0.65
TbpP29037 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11□□□□□ -0.65
TbpP29037 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11□□□□□ -0.65
TbpP29037 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11□□□□□ -0.65
TbpP29037 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11□□□□□ -0.65
TbpP29037 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11□□□□□ -0.65
TbpP29037 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11□□□□□ -0.65
TbpP29037 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TbpP29037 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TbpP29037 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.99□□□□□ -0.65
TbpP29037 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
TbpP29037 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
TbpP29037 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.99□□□□□ -0.65
TbpP29037 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.99□□□□□ -0.65
TbpP29037 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
TbpP29037 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.99□□□□□ -0.65
TbpP29037 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.99□□□□□ -0.65
TbpP29037 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.99□□□□□ -0.65
TbpP29037 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TbpP29037 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.99□□□□□ -0.65
TbpP29037 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.99□□□□□ -0.65
TbpP29037 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.99□□□□□ -0.65
TbpP29037 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.99□□□□□ -0.65
TbpP29037 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.99□□□□□ -0.65
TbpP29037 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TbpP29037 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms