Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.29■□□□□ 0.04
Nfkb1P25799 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nfkb1P25799 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nfkb1P25799 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.29■□□□□ 0.04
Nfkb1P25799 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.29■□□□□ 0.04
Nfkb1P25799 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.29■□□□□ 0.04
Nfkb1P25799 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Gm43767-201ENSMUST00000198933 381 ntBASIC15.29■□□□□ 0.04
Nfkb1P25799 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nfkb1P25799 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nfkb1P25799 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nfkb1P25799 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.28■□□□□ 0.04
Nfkb1P25799 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.28■□□□□ 0.04
Nfkb1P25799 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.28■□□□□ 0.04
Nfkb1P25799 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.28■□□□□ 0.04
Nfkb1P25799 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.28■□□□□ 0.04
Nfkb1P25799 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nfkb1P25799 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nfkb1P25799 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.28■□□□□ 0.04
Nfkb1P25799 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.28■□□□□ 0.04
Nfkb1P25799 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nfkb1P25799 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Nfkb1P25799 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.27■□□□□ 0.04
Nfkb1P25799 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.27■□□□□ 0.04
Nfkb1P25799 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nfkb1P25799 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Gm2810-201ENSMUST00000118681 990 ntBASIC15.27■□□□□ 0.04
Nfkb1P25799 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.27■□□□□ 0.04
Nfkb1P25799 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Gm5779-201ENSMUST00000218467 910 ntBASIC15.27■□□□□ 0.04
Nfkb1P25799 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nfkb1P25799 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nfkb1P25799 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nfkb1P25799 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nfkb1P25799 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Nfkb1P25799 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nfkb1P25799 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms