Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.24□□□□□ -0.13
Hoxb9P20615 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.24□□□□□ -0.13
Hoxb9P20615 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.24□□□□□ -0.13
Hoxb9P20615 Gm10154-201ENSMUST00000084445 354 ntBASIC14.24□□□□□ -0.13
Hoxb9P20615 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.24□□□□□ -0.13
Hoxb9P20615 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Hoxb9P20615 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb9P20615 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Gm9385-201ENSMUST00000117563 472 ntBASIC14.23□□□□□ -0.13
Hoxb9P20615 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.23□□□□□ -0.13
Hoxb9P20615 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Gm27301-201ENSMUST00000184012 127 ntBASIC14.23□□□□□ -0.13
Hoxb9P20615 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.23□□□□□ -0.13
Hoxb9P20615 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxb9P20615 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb9P20615 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxb9P20615 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.22□□□□□ -0.13
Hoxb9P20615 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxb9P20615 Gm12134-201ENSMUST00000122109 520 ntBASIC14.22□□□□□ -0.13
Hoxb9P20615 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms